MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0097 · 43 genes shown · anchor fadD10 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 fcoT (requalified) — fatty acyl CoA thioesterase FcoT fcoT nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp Rv0100 (requalified) — acyl carrier protein Rv0100 PPE1 (family_assigned) — PPE family protein PPE1 PPE1 Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv2686c (family_assigned) — fluoroquinolones efflux ABC transporter permease Rv2686c eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv1288 (requalified) — esterase Rv1288 rplC (requalified) — 50S ribosomal protein L3 rplC fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 Rv0095c (family_assigned) — hypothetical protein Rv0095c pks13 (requalified) — polyketide synthase Pks13 pks13 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 Rv2688c (family_assigned) — ABC transporter ATP-binding protein Rv2688c Rv0210 (family_assigned) — hypothetical protein Rv0210 rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv0955 (family_assigned) — DUF6350 family protein Rv0955 espI (family_assigned) — MinD/ParA family protein espI esxA (requalified) — ESAT-6 protein EsxA esxA eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 espB (requalified) — type VII secretion system ESX-1 target EspB espB pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv1287 (family_assigned) — RrF2 family transcriptional regulator Rv1287 Rv1289 (family_assigned) — hypothetical protein Rv1289 Rv3594 (requalified) — N-acetylmuramoyl-L-alanine amidase Rv3594 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmE (requalified) — 50S ribosomal protein L31 rpmE rplF (requalified) — 50S ribosomal protein L6 rplF

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.