MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0095c · 40 genes shown · anchor PPE1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0095c (family_assigned) — hypothetical protein Rv0095c PPE1 (family_assigned) — PPE family protein PPE1 PPE1 fcoT (requalified) — fatty acyl CoA thioesterase FcoT fcoT Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp Rv0100 (requalified) — acyl carrier protein Rv0100 fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 Rv0094c (family_assigned) — hypothetical protein Rv0094c Rv0093c (family_assigned) — membrane protein Rv0093c Rv2100 (family_assigned) — hypothetical protein Rv2100 Rv0064 (family_assigned) — UPF0182 family protein Rv0064 Rv0515 (family_assigned) — hypothetical protein Rv0515 Rv0336 (family_assigned) — hypothetical protein Rv0336 Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c pks13 (requalified) — polyketide synthase Pks13 pks13 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 Rv3467 (family_assigned) — hypothetical protein Rv3467 Rv1702c (requalified) — HNH endonuclease signature motif containing protei Rv1702c Rv3776 (family_assigned) — hypothetical protein Rv3776 Rv0393 (family_assigned) — hypothetical protein Rv0393 sigC (requalified) — RNA polymerase sigma factor SigC sigC Rv1907c (dark) — hypothetical protein Rv1907c Rv2468c (requalified) — hypothetical protein Rv2468c Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 celA2b (family_assigned) — Probable cellulase CelA2b (endo-1,4-beta-glucanase celA2b Rv3074 (family_assigned) — DUF222 domain-containing protein Rv3074 Rv1765c (family_assigned) — hypothetical protein Rv1765c Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c Rv1148c (family_assigned) — hypothetical protein Rv1148c vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 vapB1 (requalified) — antitoxin VapB1 vapB1 Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv0293c (requalified) — alpha/beta fold hydrolase Rv0293c mce2B (family_assigned) — Mce-family protein Mce2B mce2B Rv1128c (family_assigned) — hypothetical protein Rv1128c Rv1945 (requalified) — HNH endonuclease signature motif containing protei Rv1945

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.