MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0093c · 46 genes shown · anchor sigC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0093c (family_assigned) — membrane protein Rv0093c sigC (requalified) — RNA polymerase sigma factor SigC sigC Rv0094c (family_assigned) — hypothetical protein Rv0094c Rv1907c (dark) — hypothetical protein Rv1907c Rv2468c (requalified) — hypothetical protein Rv2468c Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 celA2b (family_assigned) — Probable cellulase CelA2b (endo-1,4-beta-glucanase celA2b aac (requalified) — aminoglycoside 2'-N-acetyltransferase aac Rv2843 (family_assigned) — hypothetical protein Rv2843 lppM (requalified) — lipoprotein LppM lppM Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM blaC (requalified) — beta-lactamase blaC sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c Rv3467 (family_assigned) — hypothetical protein Rv3467 Rv1702c (requalified) — HNH endonuclease signature motif containing protei Rv1702c Rv3776 (family_assigned) — hypothetical protein Rv3776 Rv0515 (family_assigned) — hypothetical protein Rv0515 Rv0336 (family_assigned) — hypothetical protein Rv0336 Rv0393 (family_assigned) — hypothetical protein Rv0393 katG (requalified) — catalase/peroxidase HPI katG Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c furA (family_assigned) — Fur family transcriptional regulator furA Rv0034 (family_assigned) — nuclear transport factor 2 family protein Rv0034 Rv2209 (requalified) — MFS transporter Rv2209 Rv2468A (family_assigned) — hypothetical protein Rv2468A qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv1638A (family_assigned) — hypothetical protein Rv1638A gyrA (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit A gyrA Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB Rv3909 (dark) — hypothetical protein Rv3909 Rv2164c (family_assigned) — hypothetical protein Rv2164c ptrp (family_assigned) — hypothetical protein ptrp celA2a (family_assigned) — Probable cellulase CelA2a (endo-1,4-beta-glucanase celA2a celA1 (requalified) — cellulase CelA celA1 bglS (requalified) — beta-glucosidase BglS bglS spmT (requalified) — sphingomyelinase spmT Rv2159c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2159c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.