MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0088 · 36 genes shown · anchor hycE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0088 (requalified) — polyketide cyclase/dehydrase Rv0088 hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE hycQ (requalified) — hydrogenase HycQ hycQ Rv0081 (family_assigned) — lsr2/espR transcriptional regulator Rv0081 hycP (family_assigned) — hypothetical protein hycP hycD (family_assigned) — respiratory chain complex I subunit 1 family prote hycD Rv0082 (family_assigned) — NADH-quinone oxidoreductase subunit B family prote Rv0082 Rv0083 (requalified) — oxidoreductase Rv0083 Rv0089 (requalified) — methyltransferase Rv0089 Rv0080 (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0080 Rv0079 (requalified) — dormancy-associated translation inhibitor Rv0079 Rv0090 (dark) — DUF2127 domain-containing protein Rv0090 Rv2529 (family_assigned) — hypothetical protein Rv2529 nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoL (family_assigned) — NADH-quinone oxidoreductase subunit L nuoL Rv3134c (requalified) — universal stress protein Rv3134c Rv1996 (requalified) — universal stress protein Rv1996 Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 TB31.7 (requalified) — universal stress protein TB31.7 TB31.7 Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738 rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsS (requalified) — 30S ribosomal protein S19 rpsS Rv2577 (family_assigned) — metallophosphoesterase family protein Rv2577 Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv2963 (requalified) — permease Rv2963 sapM (requalified) — phosphatidylinositol-3-phosphatase sapM Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 topA (requalified) — type I DNA topoisomerase topA polA (requalified) — DNA polymerase I polA lprE (family_assigned) — LppP/LprE family lipoprotein lprE Rv2090 (requalified) — 5'-3' exonuclease Rv2090 rplA (requalified) — 50S ribosomal protein L1 rplA recA (requalified) — intein-containing recombinase RecA recA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.