MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0081 · 36 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0081 (family_assigned) — lsr2/espR transcriptional regulator Rv0081 Rv0082 (family_assigned) — NADH-quinone oxidoreductase subunit B family prote Rv0082 Rv0083 (requalified) — oxidoreductase Rv0083 hycP (family_assigned) — hypothetical protein hycP hycQ (requalified) — hydrogenase HycQ hycQ hycD (family_assigned) — respiratory chain complex I subunit 1 family prote hycD hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE Rv0080 (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0080 Rv0088 (requalified) — polyketide cyclase/dehydrase Rv0088 Rv0079 (requalified) — dormancy-associated translation inhibitor Rv0079 kmtR (requalified) — Ni(II)/Co(II)-sensing metalloregulatory transcript kmtR smtB (family_assigned) — metalloregulator ArsR/SmtB family transcription fa smtB Rv0089 (requalified) — methyltransferase Rv0089 nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoL (family_assigned) — NADH-quinone oxidoreductase subunit L nuoL Rv3134c (requalified) — universal stress protein Rv3134c Rv1996 (requalified) — universal stress protein Rv1996 Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 TB31.7 (requalified) — universal stress protein TB31.7 TB31.7 Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738 rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsS (requalified) — 30S ribosomal protein S19 rpsS zur (requalified) — zinc uptake transcriptional repressor Zur zur embR (requalified) — response regulator transcription factor EmbR embR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 virS (family_assigned) — AraC family transcriptional regulator virS Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv2642 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2642 glyS (requalified) — glycine--tRNA ligase glyS cmtR (family_assigned) — Cd(II)/Pb(II)-sensing metalloregulatory transcript cmtR Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0090 (dark) — DUF2127 domain-containing protein Rv0090

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.