MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0064 · 46 genes shown · anchor vapC1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0064 (family_assigned) — UPF0182 family protein Rv0064 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 vapB1 (requalified) — antitoxin VapB1 vapB1 Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv0293c (requalified) — alpha/beta fold hydrolase Rv0293c Rv0095c (family_assigned) — hypothetical protein Rv0095c mce2B (family_assigned) — Mce-family protein Mce2B mce2B Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv3087 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3087 Rv3376 (family_assigned) — HAD family phosphatase Rv3376 Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv3378c (requalified) — diterpene synthase Rv3378c Rv3098A (family_assigned) — PemK-like protein Rv3098A vapB47 (requalified) — antitoxin VapB47 vapB47 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB29 (requalified) — antitoxin VapB29 vapB29 vapB27 (requalified) — type II toxin-antitoxin system antitoxin VapB27 vapB27 Rv3717 (family_assigned) — hypothetical protein Rv3717 xerC (requalified) — tyrosine recombinase XerC xerC hsr1 (requalified) — hypothetical protein hsr1 sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 tam (requalified) — trans-aconitate 2-methyltransferase tam Rv1874 (family_assigned) — hypothetical protein Rv1874 pirG (requalified) — exported repetitive protein pirG lipE (requalified) — lipase LipE lipE Rv2913c (family_assigned) — amidohydrolase family protein Rv2913c mprB (requalified) — two-component system sensor histidine kinase MprB mprB PPE1 (family_assigned) — PPE family protein PPE1 PPE1 fcoT (requalified) — fatty acyl CoA thioesterase FcoT fcoT Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp Rv0100 (requalified) — acyl carrier protein Rv0100 fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 Rv0588 (family_assigned) — ABC transporter permease Rv0588 mce2A (family_assigned) — Mce family protein Mce2A mce2A yrbE2A (family_assigned) — ABC transporter permease yrbE2A mce2C (family_assigned) — virulence factor Mce family protein mce2C mce2D (family_assigned) — virulence factor Mce family protein mce2D lprL (family_assigned) — Mce family lipoprotein LprL lprL iniB (requalified) — isoniazid-induced protein IniB iniB Rv2955c (requalified) — [2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-r Rv2955c Rv1004c (family_assigned) — hypothetical protein Rv1004c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.