MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0063 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv3717 (family_assigned) — hypothetical protein Rv3717 xerC (requalified) — tyrosine recombinase XerC xerC hsr1 (requalified) — hypothetical protein hsr1 sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 plsB1 (requalified) — lysophospholipid acyltransferase plsB1 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpE (family_assigned) — F0F1 ATP synthase subunit C atpE ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c recR (requalified) — recombination mediator RecR recR Rv3242c (family_assigned) — ComF family protein Rv3242c apt (requalified) — adenine phosphoribosyltransferase apt Rv2646 (requalified) — tyrosine-type recombinase/integrase Rv2646 viuB (requalified) — siderophore-interacting protein viuB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA whiA (family_assigned) — DNA-binding protein WhiA whiA Rv1005c (requalified) — para-aminobenzoate synthase component I Rv1005c trpE (requalified) — anthranilate synthase component I trpE mbtI (requalified) — salicylate synthase mbtI Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv3415c (family_assigned) — hypothetical protein Rv3415c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA pirG (requalified) — exported repetitive protein pirG Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv2120c (family_assigned) — glycine zipper 2TM domain-containing protein Rv2120c TB9.4 (family_assigned) — hypothetical protein TB9.4 fadD11 (requalified) — fatty-acid--CoA ligase FadD11 fadD11 gpdA2 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA2 gpdA1 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA1 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 plsC (family_assigned) — HAD-IB family hydrolase plsC Rv2484c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2484c Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.