MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0058 · 44 genes shown · anchor ssb · open gene page → · ← back to 1 hop

Evidence: Min score 0
dnaB (requalified) — replicative DNA helicase dnaB dnaG (requalified) — DNA primase dnaG Rv0057 (dark) — hypothetical protein Rv0057 darT (requalified) — toxin-antitoxin system toxin DarT darT ssb (family_assigned) — single-stranded DNA-binding protein ssb rplI (requalified) — 50S ribosomal protein L9 rplI Rv2943A (requalified) — transposase Rv2943A Rv2944 (requalified) — insertion sequence element IS1533 transposase Rv2944 istB (family_assigned) — IS21-like element ISMt2 family helper ATPase IstB istB Rv3638 (family_assigned) — ATP-binding protein Rv3638 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA adnA (requalified) — ATP-dependent DNA helicase AdnA adnA rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 dgt (requalified) — deoxyguanosinetriphosphate triphosphohydrolase dgt engA (requalified) — ribosome biogenesis GTPase Der engA rphA (requalified) — ribonuclease PH rphA sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB darG (requalified) — toxin-antitoxin system antitoxin DNA ADP-ribosyl g darG PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 iniB (requalified) — isoniazid-induced protein IniB iniB PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv2478c (family_assigned) — hypothetical protein Rv2478c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c rplS (requalified) — 50S ribosomal protein L19 rplS rplB (requalified) — 50S ribosomal protein L2 rplB rpsH (requalified) — 30S ribosomal protein S8 rpsH rplP (requalified) — 50S ribosomal protein L16 rplP Rv2943 (requalified) — insertion sequence element IS1533 transposase Rv2943 Rv3428c (requalified) — transposase Rv3428c Rv0071 (family_assigned) — reverse transcriptase domain-containing protein Rv0071 Rv2813 (family_assigned) — ExeA family protein Rv2813 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recF (requalified) — DNA replication/repair protein RecF recF parA (requalified) — chromosome partitioning protein ParA parA Rv3213c (family_assigned) — AAA family ATPase Rv3213c adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 Rv2191 (family_assigned) — hypothetical protein Rv2191 nudC (requalified) — NAD(+) diphosphatase nudC radA (requalified) — DNA repair protein RadA radA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.