MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0054 · 46 genes shown · anchor rplI · open gene page → · ← back to 1 hop

Evidence: Min score 0
ssb (family_assigned) — single-stranded DNA-binding protein ssb rplI (requalified) — 50S ribosomal protein L9 rplI rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv2478c (family_assigned) — hypothetical protein Rv2478c rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 dnaB (requalified) — replicative DNA helicase dnaB Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c priA (family_assigned) — primosomal protein N' priA dnaE2 (requalified) — error-prone DNA polymerase dnaE2 dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rplS (requalified) — 50S ribosomal protein L19 rplS rplB (requalified) — 50S ribosomal protein L2 rplB rpsH (requalified) — 30S ribosomal protein S8 rpsH rplP (requalified) — 50S ribosomal protein L16 rplP rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsG (requalified) — 30S ribosomal protein S7 rpsG ettA (requalified) — energy-dependent translational throttle protein Et ettA rplN (requalified) — 50S ribosomal protein L14 rplN rpsM (requalified) — 30S ribosomal protein S13 rpsM rpmI (requalified) — 50S ribosomal protein L35 rpmI rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpsT (requalified) — 30S ribosomal protein S20 rpsT dnaG (requalified) — DNA primase dnaG Rv0057 (dark) — hypothetical protein Rv0057 darT (requalified) — toxin-antitoxin system toxin DarT darT Rv2943A (requalified) — transposase Rv2943A Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c cobC (requalified) — aminotransferase cobC Rv1401 (family_assigned) — membrane protein Rv1401 fmt (requalified) — methionyl-tRNA formyltransferase fmt dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.