MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0050 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0052 (family_assigned) — hypothetical protein Rv0052 wag31 (requalified) — cell wall synthesis protein Wag31 wag31 sepIVA (requalified) — cell division protein SepIVA sepIVA ftsW (family_assigned) — putative lipid II flippase FtsW ftsW pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 mltG (requalified) — endolytic transglycosylase MltG mltG pimE (requalified) — mannosyltransferase pimE Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA fhaB (family_assigned) — FHA domain-containing protein fhaB rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 Rv1931c (family_assigned) — transcriptional regulator Rv1931c lexA (requalified) — transcriptional repressor LexA lexA sigA (requalified) — RNA polymerase sigma factor sigA Rv2144c (dark) — hypothetical protein Rv2144c Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2147c (requalified) — cell division protein SepF Rv2147c lprO (family_assigned) — phosphodiester glycosidase family protein lprO Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c rnc (requalified) — ribonuclease III rnc Rv2926c (family_assigned) — hypothetical protein Rv2926c Rv3311 (family_assigned) — primosomal protein Rv3311 Rv2923c (family_assigned) — OsmC family protein Rv2923c Rv1083 (dark) — hypothetical protein Rv1083 murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsQ (requalified) — cell division protein FtsQ ftsQ murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD Rv2164c (family_assigned) — hypothetical protein Rv2164c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.