MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0049 · 46 genes shown · anchor lprD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0049 (dark) — hypothetical protein Rv0049 lprD (family_assigned) — hypothetical protein lprD 35kd_ag (family_assigned) — hypothetical protein 35kd_ag Rv3013 (family_assigned) — amino acid-binding protein Rv3013 Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 Rv1638A (family_assigned) — hypothetical protein Rv1638A Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 Rv1481 (family_assigned) — VWA domain-containing protein Rv1481 Rv2468c (requalified) — hypothetical protein Rv2468c ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv1342c (family_assigned) — hypothetical protein Rv1342c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0358 (requalified) — peptidase M50 Rv0358 clgR (family_assigned) — transcriptional regulator ClgR clgR Rv2743c (family_assigned) — hypothetical protein Rv2743c htpX (requalified) — zinc metalloprotease HtpX htpX sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c rpsD (requalified) — 30S ribosomal protein S4 rpsD rplB (requalified) — 50S ribosomal protein L2 rplB rpmE (requalified) — 50S ribosomal protein L31 rpmE rpsO (requalified) — 30S ribosomal protein S15 rpsO rplO (requalified) — 50S ribosomal protein L15 rplO rpsE (requalified) — 30S ribosomal protein S5 rpsE Rv0052 (family_assigned) — hypothetical protein Rv0052 pimE (requalified) — mannosyltransferase pimE Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv1639c (family_assigned) — alpha/beta hydrolase family protein Rv1639c Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv2474c (family_assigned) — hypothetical protein Rv2474c Rv1083 (dark) — hypothetical protein Rv1083 cei (requalified) — envelope integrity protein Cei cei folE (requalified) — GTP cyclohydrolase I FolE folE folK (requalified) — 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine folK folP1 (requalified) — dihydropteroate synthase folP1 folB (requalified) — dihydroneopterin aldolase folB ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.