MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0043c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0043c (family_assigned) — GntR family transcriptional regulator Rv0043c Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 embR (requalified) — response regulator transcription factor EmbR embR moxR2 (family_assigned) — MoxR family ATPase moxR2 Rv0044c (requalified) — LLM class F420-dependent oxidoreductase Rv0044c Rv3840 (family_assigned) — transcriptional regulator Rv3840 moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 Rv0042c (family_assigned) — transcriptional regulator Rv0042c Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv0045c (family_assigned) — alpha/beta hydrolase Rv0045c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3693 (family_assigned) — DUF58 domain-containing protein Rv3693 Rv3691 (family_assigned) — hypothetical protein Rv3691 Rv1453 (family_assigned) — PucR family transcriptional regulator Rv1453 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 fgd1 (requalified) — glucose-6-phosphate dehydrogenase (coenzyme-F420) fgd1 ino1 (requalified) — inositol-3-phosphate synthase ino1 fgd2 (requalified) — F420-dependent hydroxymycolic acid dehydrogenase fgd2 ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn cobB (requalified) — NAD-dependent protein deacylase cobB tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv0049 (dark) — hypothetical protein Rv0049 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv0047c (family_assigned) — PadR family transcriptional regulator Rv0047c Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.