MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0042c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0042c (family_assigned) — transcriptional regulator Rv0042c Rv0043c (family_assigned) — GntR family transcriptional regulator Rv0043c Rv0044c (requalified) — LLM class F420-dependent oxidoreductase Rv0044c Rv0045c (family_assigned) — alpha/beta hydrolase Rv0045c ino1 (requalified) — inositol-3-phosphate synthase ino1 Rv0049 (dark) — hypothetical protein Rv0049 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c prrA (requalified) — two-component system response regulator PrrA prrA htpG (requalified) — molecular chaperone HtpG htpG treS (requalified) — maltose alpha-D-glucosyltransferase treS ald (requalified) — alanine dehydrogenase ald Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 embR (requalified) — response regulator transcription factor EmbR embR moxR2 (family_assigned) — MoxR family ATPase moxR2 Rv3840 (family_assigned) — transcriptional regulator Rv3840 moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 fgd1 (requalified) — glucose-6-phosphate dehydrogenase (coenzyme-F420) fgd1 fgd2 (requalified) — F420-dependent hydroxymycolic acid dehydrogenase fgd2 ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn Rv0047c (family_assigned) — PadR family transcriptional regulator Rv0047c Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c impA (family_assigned) — inositol monophosphatase family protein impA suhB (requalified) — inositol-1-monophosphatase SuhB suhB Rv0650 (family_assigned) — ROK family protein Rv0650 pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 lprD (family_assigned) — hypothetical protein lprD 35kd_ag (family_assigned) — hypothetical protein 35kd_ag Rv3013 (family_assigned) — amino acid-binding protein Rv3013 Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 Rv1638A (family_assigned) — hypothetical protein Rv1638A Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 fadD29 (requalified) — long-chain-fatty-acid--AMP ligase FadD29 fadD29 pks15 (requalified) — polyketide synthase pks15 entC (requalified) — isochorismate synthase entC Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 prrB (requalified) — two-component system sensor histidine kinase PrrB prrB Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.