MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0041 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
leuS (requalified) — leucine--tRNA ligase leuS metS (requalified) — methionine--tRNA ligase metS pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT ileS (requalified) — isoleucine--tRNA ligase ileS gltS (requalified) — glutamate--tRNA ligase gltS argS (requalified) — arginine--tRNA ligase argS Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c proS (requalified) — proline--tRNA ligase proS valS (requalified) — valine--tRNA ligase valS lysX (requalified) — bifunctional lysine--tRNA ligase/phosphatidylglyce lysX lysS (requalified) — lysine--tRNA ligase lysS mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 alaS (requalified) — alanine--tRNA ligase alaS tatD (requalified) — deoxyribonuclease TatD tatD metH (requalified) — methionine synthase metH pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO rplW (requalified) — 50S ribosomal protein L23 rplW rplR (requalified) — 50S ribosomal protein L18 rplR rplF (requalified) — 50S ribosomal protein L6 rplF rplV (requalified) — 50S ribosomal protein L22 rplV rplM (requalified) — 50S ribosomal protein L13 rplM rplJ (requalified) — 50S ribosomal protein L10 rplJ guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c folC (requalified) — bifunctional tetrahydrofolate synthase/dihydrofola folC Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c ndkA (requalified) — nucleoside-diphosphate kinase ndkA pirG (requalified) — exported repetitive protein pirG Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv0039c (dark) — hypothetical protein Rv0039c Rv1158c (dark) — hypothetical protein Rv1158c ruvX (requalified) — Holliday junction resolvase RuvX ruvX mltG (requalified) — endolytic transglycosylase MltG mltG Rv1691 (family_assigned) — hypothetical protein Rv1691 Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv2267c (requalified) — sulfotransferase Rv2267c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.