MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0039c · 42 genes shown · anchor leuS · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0039c (dark) — hypothetical protein Rv0039c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 leuS (requalified) — leucine--tRNA ligase leuS Rv1021 (requalified) — nucleoside triphosphate pyrophosphohydrolase Rv1021 Rv1006 (family_assigned) — hypothetical protein Rv1006 hadC (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadC hadC Rv0010c (family_assigned) — PH domain-containing protein Rv0010c pirG (requalified) — exported repetitive protein pirG Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv1158c (dark) — hypothetical protein Rv1158c metS (requalified) — methionine--tRNA ligase metS pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT ileS (requalified) — isoleucine--tRNA ligase ileS gltS (requalified) — glutamate--tRNA ligase gltS argS (requalified) — arginine--tRNA ligase argS Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB guaB2 (requalified) — IMP dehydrogenase guaB2 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 hsr1 (requalified) — hypothetical protein hsr1 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv3033 (requalified) — DUF4333 domain-containing protein Rv3033 Rv2114 (dark) — hypothetical protein Rv2114 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 hadB (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadB hadB hadA (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadA hadA rpsH (requalified) — 30S ribosomal protein S8 rpsH rplB (requalified) — 50S ribosomal protein L2 rplB rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplF (requalified) — 50S ribosomal protein L6 rplF crgA (requalified) — cell division protein CrgA crgA Rv3839 (requalified) — DUF2470 domain-containing protein Rv3839 cfp6 (requalified) — low molecular weight protein antigen 6 cfp6 Rv2732c (family_assigned) — hypothetical protein Rv2732c lppM (requalified) — lipoprotein LppM lppM Rv1100 (family_assigned) — hypothetical protein Rv1100

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.