MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0034 · 45 genes shown · anchor acpA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0034 (family_assigned) — nuclear transport factor 2 family protein Rv0034 acpA (requalified) — acyl carrier protein acpA fadD34 (requalified) — fatty-acid--CoA ligase FadD34 fadD34 bioF2 (family_assigned) — pyridoxal phosphate-dependent aminotransferase fam bioF2 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv1907c (dark) — hypothetical protein Rv1907c PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 tyzC (requalified) — hypothetical protein tyzC Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c PE_PGRS42 (family_assigned) — PE-PGRS family protein PE_PGRS42 PE_PGRS42 iniB (requalified) — isoniazid-induced protein IniB iniB PPE8 (family_assigned) — PPE family protein PPE8 PPE8 fas (requalified) — fatty acid synthase fas nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB mbtE (requalified) — peptide synthetase mbtE PPE35 (family_assigned) — PPE family protein PPE35 PPE35 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC bioA (requalified) — adenosylmethionine--8-amino-7-oxononanoate transam bioA bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 bioD (requalified) — dethiobiotin synthase bioD Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2306A (family_assigned) — Possible conserved membrane protein Rv2306A Rv2306B (family_assigned) — Possible conserved membrane protein Rv2306B katG (requalified) — catalase/peroxidase HPI katG furA (family_assigned) — Fur family transcriptional regulator furA Rv0093c (family_assigned) — membrane protein Rv0093c Rv2209 (requalified) — MFS transporter Rv2209 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE54 (family_assigned) — PPE family protein PPE54 PPE54 moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX moeW (family_assigned) — ThiF family adenylyltransferase moeW Rv0329c (requalified) — class I SAM-dependent methyltransferase Rv0329c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv3091 (family_assigned) — patatin-like phospholipase family protein Rv3091 Rv1060 (family_assigned) — SRPBCC family protein Rv1060 Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c PPE6 (family_assigned) — PPE family protein PPE6 PPE6 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.