MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0032 · 46 genes shown · anchor bioA · open gene page → · ← back to 1 hop

Evidence: Min score 0
bioF2 (family_assigned) — pyridoxal phosphate-dependent aminotransferase fam bioF2 bioA (requalified) — adenosylmethionine--8-amino-7-oxononanoate transam bioA acpA (requalified) — acyl carrier protein acpA Rv0034 (family_assigned) — nuclear transport factor 2 family protein Rv0034 fadD34 (requalified) — fatty-acid--CoA ligase FadD34 fadD34 bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 bioD (requalified) — dethiobiotin synthase bioD bioB (requalified) — biotin synthase BioB bioB PPE35 (family_assigned) — PPE family protein PPE35 PPE35 gcvT (requalified) — aminomethyltransferase gcvT Rv3329 (requalified) — aminotransferase Rv3329 Rv1895 (requalified) — zinc-binding alcohol dehydrogenase Rv1895 Rv3726 (requalified) — zinc-binding dehydrogenase Rv3726 Rv1571 (family_assigned) — 2'-5' RNA ligase family protein Rv1571 Rv1567c (family_assigned) — membrane protein Rv1567c fas (requalified) — fatty acid synthase fas nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv1907c (dark) — hypothetical protein Rv1907c PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 mbtE (requalified) — peptide synthetase mbtE ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS Rv1590 (family_assigned) — hypothetical protein Rv1590 birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA Rv1591 (dark) — DUF2567 domain-containing protein Rv1591 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PE_PGRS23 (family_assigned) — PE-PGRS family protein PE_PGRS23 PE_PGRS23 Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 gcvH (requalified) — glycine cleavage system protein GcvH gcvH gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ sodA (requalified) — superoxide dismutase sodA adhC (requalified) — NAD(P)-dependent alcohol dehydrogenase adhC adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.