MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0029 · 30 genes shown · anchor eccC2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0029 (dark) — DUF5631 domain-containing protein Rv0029 Rv0030 (family_assigned) — DUF2710 domain-containing protein Rv0030 Rv0028 (family_assigned) — DUF2694 domain-containing protein Rv0028 otsB2 (requalified) — trehalose-phosphatase otsB2 Rv0027 (family_assigned) — ESX-1 secretion-associated protein Rv0027 otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 sigG (family_assigned) — sigma-70 family RNA polymerase sigma factor SigG sigG Rv0023 (family_assigned) — helix-turn-helix transcriptional regulator Rv0023 Rv0025 (dark) — DUF4226 domain-containing protein Rv0025 whiB5 (family_assigned) — transcriptional regulator WhiB5 whiB5 Rv0026 (dark) — hypothetical protein Rv0026 otsA (requalified) — trehalose-6-phosphate synthase otsA Rv2402 (requalified) — trehalase Rv2402 treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 Rv2004c (family_assigned) — AAA family ATPase Rv2004c eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv0181c (family_assigned) — pirin family protein Rv0181c Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv0183 (requalified) — monoacylglycerol lipase Rv0183 Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.