MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0026 · 27 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0026 (dark) — hypothetical protein Rv0026 Rv0025 (dark) — DUF4226 domain-containing protein Rv0025 Rv0027 (family_assigned) — ESX-1 secretion-associated protein Rv0027 Rv0028 (family_assigned) — DUF2694 domain-containing protein Rv0028 Rv0023 (family_assigned) — helix-turn-helix transcriptional regulator Rv0023 Rv0024 (family_assigned) — C40 family peptidase Rv0024 whiB5 (family_assigned) — transcriptional regulator WhiB5 whiB5 nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ ligD (requalified) — ATP-dependent DNA ligase ligD Rv0029 (dark) — DUF5631 domain-containing protein Rv0029 ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA ripC (requalified) — peptidoglycan hydrolase RipC ripC mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 nrdB (requalified) — R2-like ligand-binding oxidase nrdB Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk Rv0939 (family_assigned) — fumarylacetoacetate hydrolase family protein Rv0939 mku (requalified) — Ku protein mku lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.