MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0020c · 46 genes shown · anchor murJ · open gene page → · ← back to 1 hop

Evidence: Min score 0
fhaA (requalified) — cell division-associated protein FhaA fhaA murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB fhaB (family_assigned) — FHA domain-containing protein fhaB pknA (requalified) — serine/threonine protein kinase PknA pknA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3909 (dark) — hypothetical protein Rv3909 mutT4 (requalified) — NUDIX hydrolase mutT4 Rv3906c (requalified) — pullulanase Rv3906c rsmA (requalified) — anti-sigma-M factor RsmA rsmA sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu pknD (requalified) — serine/threonine protein kinase PknD pknD pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB ftsW (family_assigned) — putative lipid II flippase FtsW ftsW rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c lppL (family_assigned) — hypothetical protein lppL Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c recO (requalified) — DNA repair protein RecO recO amiA2 (requalified) — amidase amiA2 Rv0497 (family_assigned) — hypothetical protein Rv0497 xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.