MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0016c · 33 genes shown · anchor rodA · open gene page → · ← back to 1 hop

Evidence: Min score 0
pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB ftsW (family_assigned) — putative lipid II flippase FtsW ftsW pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA ftsQ (requalified) — cell division protein FtsQ ftsQ fhaB (family_assigned) — FHA domain-containing protein fhaB ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 fhaA (requalified) — cell division-associated protein FhaA fhaA ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF Rv2164c (family_assigned) — hypothetical protein Rv2164c rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu pknD (requalified) — serine/threonine protein kinase PknD pknD garA (requalified) — glycogen accumulation regulator GarA garA Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c sepIVA (requalified) — cell division protein SepIVA sepIVA wag31 (requalified) — cell wall synthesis protein Wag31 wag31 Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0052 (family_assigned) — hypothetical protein Rv0052 murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.