MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0008c · 46 genes shown · anchor ppiA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0008c (requalified) — cell wall synthesis protein CwsA Rv0008c ppiA (requalified) — iron-regulated peptidyl-prolyl cis-trans isomerase ppiA crgA (requalified) — cell division protein CrgA crgA wag31 (requalified) — cell wall synthesis protein Wag31 wag31 dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 ldtB (requalified) — L%2CD-transpeptidase LdtMt2 ldtB ftsZ (requalified) — cell division protein FtsZ ftsZ pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA ftsK (requalified) — DNA translocase FtsK ftsK pknA (requalified) — serine/threonine protein kinase PknA pknA ftsQ (requalified) — cell division protein FtsQ ftsQ fadE22 (requalified) — acyl-CoA dehydrogenase fadE22 ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv0010c (family_assigned) — PH domain-containing protein Rv0010c Rv0012 (family_assigned) — membrane protein Rv0012 trpG (requalified) — anthranilate synthase component II trpG Rv3311 (family_assigned) — primosomal protein Rv3311 Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv3259 (family_assigned) — metallopeptidase family protein Rv3259 Rv2144c (dark) — hypothetical protein Rv2144c ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2147c (requalified) — cell division protein SepF Rv2147c lprO (family_assigned) — phosphodiester glycosidase family protein lprO Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c dacB2 (family_assigned) — penicillin-binding protein DacB2 dacB2 dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA sugI (requalified) — sugar-transport integral membrane protein SugI sugI Rv3329 (requalified) — aminotransferase Rv3329 ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 Rv3015c (requalified) — methionine synthase Rv3015c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c yfiH (family_assigned) — laccase domain-containing protein yfiH ftsW (family_assigned) — putative lipid II flippase FtsW ftsW rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.