MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0005 · 46 genes shown · anchor gyrA · open gene page → · ← back to 1 hop

Evidence: Min score 0
gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB gyrA (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit A gyrA mfpA (requalified) — pentapeptide repeat protein MfpA mfpA Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 recF (requalified) — DNA replication/repair protein RecF recF dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv0004 (requalified) — DNA replication protein DciA Rv0004 Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 truB (requalified) — tRNA pseudouridine(55) synthase TruB truB pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv3769 (family_assigned) — hypothetical protein Rv3769 Rv2731 (family_assigned) — DUF349 domain-containing protein Rv2731 eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rplK (requalified) — 50S ribosomal protein L11 rplK Rv3363c (family_assigned) — DUF742 domain-containing protein Rv3363c Rv3362c (family_assigned) — ATP/GTP-binding protein Rv3362c Rv3365c (requalified) — sensor histidine kinase Rv3365c Rv3364c (requalified) — serine protease inhibitor Rv3364c spoU (requalified) — tRNA (cytidine(34)-2'-O)-methyltransferase spoU xylB (requalified) — FGGY-family carbohydrate kinase xylB pepE (family_assigned) — Xaa-Pro peptidase family protein pepE serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 fucA (requalified) — L-fuculose-phosphate aldolase fucA dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA Rv2147c (requalified) — cell division protein SepF Rv2147c polA (requalified) — DNA polymerase I polA dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv2256c (dark) — hypothetical protein Rv2256c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 Rv3909 (dark) — hypothetical protein Rv3909 Rv2164c (family_assigned) — hypothetical protein Rv2164c ptrp (family_assigned) — hypothetical protein ptrp dnaK (requalified) — molecular chaperone DnaK dnaK Rv2372c (requalified) — 16S rRNA (uracil(1498)-N(3))-methyltransferase Rv2372c htpG (requalified) — molecular chaperone HtpG htpG Rv2264c (family_assigned) — Hsp70 family protein Rv2264c hrcA (requalified) — heat-inducible transcriptional repressor HrcA hrcA Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.