MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0002 · 35 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
dnaN (family_assigned) — DNA polymerase III subunit beta dnaN polA (requalified) — DNA polymerase I polA dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ recF (requalified) — DNA replication/repair protein RecF recF Rv2090 (requalified) — 5'-3' exonuclease Rv2090 helZ (requalified) — DEAD/DEAH box helicase helZ dinX (requalified) — DNA polymerase IV dinX lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 dnaB (requalified) — replicative DNA helicase dnaB parA (requalified) — chromosome partitioning protein ParA parA Rv3213c (family_assigned) — AAA family ATPase Rv3213c uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB Rv0004 (requalified) — DNA replication protein DciA Rv0004 gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2147c (requalified) — cell division protein SepF Rv2147c ligC (requalified) — ATP-dependent DNA ligase ligC Rv2102 (family_assigned) — hypothetical protein Rv2102 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv3395c (family_assigned) — hypothetical protein Rv3395c lexA (requalified) — transcriptional repressor LexA lexA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.