MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0001 · 46 genes shown · anchor dnaN · open gene page → · ← back to 1 hop

Evidence: Min score 0
dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK dnaB (requalified) — replicative DNA helicase dnaB recF (requalified) — DNA replication/repair protein RecF recF parA (requalified) — chromosome partitioning protein ParA parA Rv3213c (family_assigned) — AAA family ATPase Rv3213c Rv1708 (requalified) — initiation inhibitor protein Rv1708 rnpA (requalified) — ribonuclease P protein component rnpA yidC (requalified) — membrane protein insertase YidC yidC gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA moeB2 (requalified) — molybdenum cofactor biosynthesis protein MoeB moeB2 moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 polA (requalified) — DNA polymerase I polA dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv2090 (requalified) — 5'-3' exonuclease Rv2090 helZ (requalified) — DEAD/DEAH box helicase helZ ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB dnaG (requalified) — DNA primase dnaG Rv0057 (dark) — hypothetical protein Rv0057 darT (requalified) — toxin-antitoxin system toxin DarT darT ssb (family_assigned) — single-stranded DNA-binding protein ssb rplI (requalified) — 50S ribosomal protein L9 rplI Rv2943A (requalified) — transposase Rv2943A Rv0004 (requalified) — DNA replication protein DciA Rv0004 gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2147c (requalified) — cell division protein SepF Rv2147c parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c yidD (requalified) — membrane protein insertion efficiency factor YidD yidD Rv2647 (requalified) — hypothetical protein Rv2647 entC (requalified) — isochorismate synthase entC gpm2 (requalified) — phosphoglycerate mutase gpm2 ftsK (requalified) — DNA translocase FtsK ftsK scpA (requalified) — segregation/condensation protein A scpA scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 engA (requalified) — ribosome biogenesis GTPase Der engA rpmH (requalified) — 50S ribosomal protein L34 rpmH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.