MTBC Gene Atlas

Genome browser

Linear view of the M. tuberculosis complex genome (MTBC0 ancestral coordinates, H37Rv locus tags). Each arrow is a gene, pointing in its coding direction and coloured by annotation verdict. Click a gene to open its page.

◀ Pan left Pan right ▶ + Zoom in − Zoom out window 4 058 671–4 098 671 bp (40 000 bp)
+ strand − strand lpqF (Rv3593) — requalified: serine hydrolase Rv3594 (Rv3594) — requalified: N-acetylmuramoyl-L-alanine amidase lsr2 (Rv3597c) — requalified: histone-like nucleoid-structuring protein Lsr2 lysS (Rv3598c) — requalified: lysine--tRNA ligase lysS Rv3600c (Rv3600c) — requalified: type III pantothenate kinase panD (Rv3601c) — requalified: aspartate 1-decarboxylase panC (Rv3602c) — requalified: pantoate--beta-alanine ligase Rv3603c (Rv3603c) — family_assigned: Rossmann-like and DUF2520 domain-containing protein Rv3604c (Rv3604c) — dark: DUF6779 domain-containing protein Rv3604c Rv3605c (Rv3605c) — family_assigned: DUF3180 domain-containing protein folK (Rv3606c) — requalified: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphok folE (Rv3609c) — requalified: GTP cyclohydrolase I FolE ftsH (Rv3610c) — requalified: ATP-dependent zinc metalloprotease FtsH ftsH Rv3612c (Rv3612c) — dark: hypothetical protein Rv3613c (Rv3613c) — family_assigned: hypothetical protein espD (Rv3614c) — requalified: type VII secretion system ESX-1 target EspD espC (Rv3615c) — requalified: type VII secretion system ESX-1 filament-forming target EspC espA (Rv3616c) — requalified: type VII secretion system ESX-1 target EspA espA ephA (Rv3617) — requalified: epoxide hydrolase EphA Rv3618 (Rv3618) — requalified: LLM class flavin-dependent oxidoreductase Rv3618 esxI (Rv1037c) — requalified: type VII secretion system ESX-5 protein EsxL esxW (Rv3620c) — requalified: type VII secretion system protein EsxW lpqG (Rv3623) — family_assigned: SIMPL domain-containing protein hpt (Rv3624c) — requalified: hypoxanthine phosphoribosyltransferase mesJ (Rv3625c) — requalified: tRNA lysidine(34) synthetase TilS Rv3626c (Rv3626c) — requalified: zinc-dependent metalloprotease Rv3626c dacB (Rv3627c) — requalified: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endop dacB ppa (Rv3628) — requalified: inorganic diphosphatase Rv3629c (Rv3629c) — family_assigned: DUF475 domain-containing protein Rv3629c Rv3630 (Rv3630) — family_assigned: hypothetical protein Rv3630 Rv3631 (Rv3631) — family_assigned: glycosyltransferase family 2 protein Rv3632 (Rv3632) — family_assigned: DUF2304 domain-containing protein Rv3633 (Rv3633) — family_assigned: phytanoyl-CoA dioxygenase family protein galE1 (Rv3634c) — requalified: UDP-glucose 4-epimerase Rv3635 (Rv3635) — family_assigned: hypothetical protein Rv3635 4 062 kb 4 069 kb 4 076 kb 4 082 kb 4 088 kb 4 095 kb

■ resolved (requalified)   ■ family assigned   ■ still unknown (dark)  ·  the centred gene is outlined in black.